Regarding New Visa

I came back from ksa on vaccation and I cannot gi back to ksa because of some medical treatment.I already informed my company and they send exit re entry extention visa.But due to flood in kerala its become late to reach here in the travel agency.Now I got that one and I submitt my passport,photos and other documents.Now the travel agency informed me its cannot stamp because its already crossed 7 months.What will be the next step,please advice
My iqama expires on May 2019 ,can my sponsor can cancell my iqama and apply new visa for me..

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